BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039C01SP1|AL430670
(895 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig947 1746 0.0
>3x_Contig947
Length = 3468
Score = 1746 bits (881), Expect = 0.0
Identities = 893/896 (99%), Gaps = 1/896 (0%)
Strand = Plus / Plus
Query: 1 gaaaagtgcataaaaacgccacaacaagcacaaccaccgccccaaccacacccttacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2334 gaaaagtgcataaaaacgccacaacaagcacaaccaccgccccaaccacacccttacaga 2393
Query: 61 ccaaattgagccacattgcagtccgaaccattccccgtgaccggttagccatgactacgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2394 ccaaattgagccacattgcagtccgaaccattccccgtgaccggttagccatgactacgg 2453
Query: 121 cacagcacgtgacagttaccatttgcccaacctacgtcggtcttataccacactatttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2454 cacagcacgtgacagttaccatttgcccaacctacgtcggtcttataccacactatttac 2513
Query: 181 gtcaaaacaccgtgcaggaaaccatgtggaaaccattaggcaaaccacatgtgaaatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2514 gtcaaaacaccgtgcaggaaaccatgtggaaaccattaggcaaaccacatgtgaaatgct 2573
Query: 241 gtgcgattcgtgggaagtgttattttgacgacatgtgcttttctatggtatctgagagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2574 gtgcgattcgtgggaagtgttattttgacgacatgtgcttttctatggtatctgagagag 2633
Query: 301 ccccatctctgcagaaagaatcctttggtgaattgtggtgaaaagttttgttctgttacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2634 ccccatctctgcagaaagaatcctttggtgaattgtggtgaaaagttttgttctgttacg 2693
Query: 361 ttccgatgagctcaagtcaaaagtaagtagtagtagcagcagtagtaatagtggcagttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2694 ttccgatgagctcaagtcaaaagtaagtagtagtagcagcagtagtaatagtggcagttt 2753
Query: 421 tgtagttgagcagattttttcgtgggaacgactagagcagccgaa-gtaattaagactca 479
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2754 tgtagttgagcagattttttcgtgggaacgactagagcagccgaaggtaattaagactca 2813
Query: 480 tcgtttaaacgatgtttgttggatcagaaacttcagtccaaagaggatctgaaaaaaaat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2814 tcgtttaaacgatgtttgttggatcagaaacttcagtccaaagaggatctgaaaaaaaat 2873
Query: 540 gtatataagcagtcgactcttgatgtaatttgaggagtgacaattgttcatcattacaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2874 gtatataagcagtcgactcttgatgtaatttgaggagtgacaattgttcatcattacaat 2933
Query: 600 aataaaaggaattatgtgtactttgtttaaatacagatttatttcctttatcattcagtt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2934 aataaaaggaattatgtgtactttgtttaaatacagatttatttcctttatcattcagtt 2993
Query: 660 tgagtttaatatcttaagccaaacaaaccaatcactaatcatacattagtttgtcaataa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2994 tgagtttaatatcttaagccaaacaaaccaatcactaatcatacattagtttgtcaataa 3053
Query: 720 caaaatggttcaatcatacgtcttagggttcccaagaattgggccaaacagagaattgaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3054 caaaatggttcaatcatacgtcttagggttcccaagaattgggccaaacagagaattgaa 3113
Query: 780 gaaggctaccgaaggtnactggaacggtaaggtctctgctgaacaattacaacaagttgc 839
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3114 gaaggctaccgaagggtactggaacggtaaggtctctgctgaacaattacaacaagttgc 3173
Query: 840 taaggacatcaaggcctctaactggaagttgcaaaaggatgctggtgtcaatgtca 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3174 taaggacatcaaggcctctaactggaagttgcaaaaggatgctggtgtcaatgtca 3229
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6200
Number of Sequences: 1807
Number of extensions: 6200
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 895
length of database: 10,358,551
effective HSP length: 16
effective length of query: 879
effective length of database: 10,329,639
effective search space: 9079752681
effective search space used: 9079752681
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)